Journal of Shanghai University(Natural Science Edition) ›› 2010, Vol. 16 ›› Issue (6): 635-638.

• Mathematics.Physics and Chemistry • Previous Articles     Next Articles

Computer Prediction of HSPC300/hHBRK1 Protein and  Myosin Ⅵ Protein Interaction Sites

  

  1. (College of Sciences, Shanghai University, Shanghai 200444, China)
  • Received:2009-05-04 Online:2010-12-21 Published:2010-12-21

Abstract:

HSPC300/hHBRK1 protein involved in cell movement and material transport is a kind of human homologous proteins. Myosin Ⅵ protein is a member of the myosin family. It is possible that HSPC300/hHBRK1 protein andmyosin Ⅵ protein react for the reason that they are present in the cytoplasm of cells and they are both involved inintracellular transport of the material. To lay a foundation for further experiments, we predict the area of interactionunder the structural point by computer simulation of proteinprotein interactions, and find the related residues that may become the sites of amino acid interaction: PHE43, LYS105, THR676 and LEU40.

Key words: HSPC300/hHBRK1; myosin Ⅵ; structure prediction; docking

CLC Number: