上海大学学报(自然科学版) ›› 2023, Vol. 29 ›› Issue (2): 253-.doi: 10.12066/j.issn.1007-2861.2470

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补骨脂乙素治疗溃疡性结肠炎的分子作用机制

杨 提, 李 珊, 邓生琼   

  1. 上海市浦东新区公利医院, 上海 200135)
  • 收稿日期:2022-08-15 出版日期:2023-04-30 发布日期:2023-04-30
  • 通讯作者: 邓生琼 (1981—), 女, 副教授, 博士, 研究方向为临床数据挖掘. E-mail:joan0626@shu.edu.cn
  • 基金资助:
    上海市医院协会医院管理研究基金项目; 浦东新区卫生健康委员会学科带头人培养计划资助项目 (PWRd2020-10); 浦东新区卫生系统重点学科群建设资助项目 (PWZxq2022-08); 上海市浦东新区科 技发展基金民生科研专项资金医疗卫生项目 (PKJ2019-Y22)

Mechanism of isobavachalcone in treatment of ulcerative colitis

YANG Ti, LI Shan, DENG Shengqiong   

  1. Gongli Hospital of Shanghai Pudong New Area, Shanghai 200135, China
  • Received:2022-08-15 Online:2023-04-30 Published:2023-04-30

摘要: 利用网络药理学方法联合 GEO 基因芯片及分子对接探索补骨脂乙素治疗溃疡性结肠炎 (ulcerative colitis, UC) 的潜在作用机制. 通过 PubChem 等数据库预测补骨脂乙素靶点;在 GeneCards、DisGeNET 等数据库检索 UC 作用靶点合并 GEO 芯片提取的差异基因去重后得到 UC 靶点, 对药物与疾病交集基因进行富集分析; 构建交集基因蛋白互作网络筛选出核心靶点, 分子对接初步验证药物与核心靶点的结合活性. 结果: 筛选出交集基因 107 个; 富集分析显示基因功能多与炎症相关; 筛选得到核心靶点 AKT1、MMP9、EGFR、IGF1、SRC;分子对接模拟验证显示药物与核心靶点之间有较好的结合活性. 提示补骨脂乙素可能通过作用于核心靶点调节炎症相关信号通路进而发挥抗 UC 的作用, 可为后续深入研究提供数据支持.

关键词: 网络药理学, GEO 数据库, 补骨脂乙素, 溃疡性结肠炎

Abstract: The potential mechanism of isobavachalcone in tr ulcerative colitis (UC) treat-ment was explored using network pharmacology, Gene Expression Omnibus (GEO) se-quencing data, and molecular docking. Isobavachalcone targets were obtained from Pub-Chem and other databases. Disease targets of UC were obtained from GeneCards, Dis-GeNET, and the GEO database. The intersection of two data sets was used to obtain isobavachalcone targets for UC. The core targets were screened by constructing the in-tersection gene protein interaction network, and the binding activity between drugs and core targets was preliminarily verified using molecular docking. In total, 107 drug and disease intersection genes were obtained. Enrichment analysis was predominantly related to inflammation. Core targets AKT1, MMP9, EGFR, IGF1, and SRC were obtained by screening. Good binding activity between isobavachalcone and core targets was confirmed by molecular docking simulation. Accordingly, the therapeutic role of isobavachalcone in UC may be mediated via the regulation of inflammation-related signaling pathways by acting on core targets, providing data support for subsequent in-depth studies.

Key words: network pharmacology, GEO database, isobavachalcone, ulcerative colitis

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