[1] 俞艳, 郭胜利, 何建华. 基于Web 服务的土地适应性评价PSE 设计与实现[J]. 武汉大学学报, 2006(6): 544-547.[2] Hesper B, Hogeweg P. Bioinformatica: een werk concept [J]. Kameleon, 1970, 1(6): 28-29.[3] Gallopoulos E, Houstis E, Rice J R. Computer as Thinker/Doer: problem-solving environments for computational science [J]. IEEE Computational Science andEngineering, 1994, 2(1): 11-23.[4] Boonmee C, Kawata S. Computer-assisted simulation environment for partial-differential-equation problem, 1. data structure and steering of problem solving process [J]. Transactions of the Japan Society for Computational Engineering and Science, Paper No. 19980001,1998.[5] Boonmee C, Kawata S. Computer-assisted simulation environment for partial-differential-equation problem, 2. Visualization and steering of problem solving process[J]. Transactions of the Japan Society for Computational Engineering and Science, Paper No. 19980002, 1998.[6] Kawata S, Boonmee C. Visual steering of the simulation process in a scientific numerical simulation environment NCAS [J]. Enabling Technologies for ComputationalScience, 2000, 548: 291-300.[7] Mu M. PDE mart: a network-based problem solving environment for PDEs [J]. ACM Trans Mathematical Software, 2005, 31(4): 508-531.[8] Mao G Y, Mu M. Grid-based PDE. Mart: a PDEoriented PSE for grid computing [C]// The 1st International Conference on e-Science and Grid Computing. 2005: 464-469.[9] Kobashi H, Kawata S. PSE park: a framework to construct problem solving environments [C]// The 12th PSE Workshop. 2009.[10] Akarsu E, Fox G C, Furmanski W. Webflow-highlevel programming environment and visual authoring toolkit for high performance distributed computing[C]// ACM/IEEE conference on Supercomputing. 1998: 1-7.[11] Goodale T, Allen G, Lanfermann G. The cactus framework and toolkit: design and applications [C]// High Performance Computing for Computational Science—VECPAR 2002. 2003, 2565: 197-227.[12] The Grid Portal Toolkit [EB/OL]. [2012-11-19]. http:// gridport. npaci.edu.[13] Apweiler R, Bairoch A. UniProt: the universal protein knowledge base [J]. Nucleic Acids Res, 2004, 32(1): 115-119.[14] 赵志康, 谢江, 李松倍. 基于Web Service 的蛋白质相互作用网络PSE [J]. 计算机工程与设计, 2009, 30(18):4326-4329.[15] 毛国勇, 张晓斌, 谢江. 面向生物信息学的网格问题求解平台[J]. 计算机工程, 2010, 36(11): 253-255.[16] 毛国勇, 张晓斌, 谢江. 基于Web 的PSE-Bio 交互式可视化[J]. 计算机工程与应用, 2010, 46(31): 77-79.[17] Xie J, Zhang X B, Zhang W. PSE-Bio: a grid enabled problem solving environment for bioinformatics [C]// The 3rd IEEE International Conference on e-Scienceand Grid Computing. 2007: 529-535.[18] Xie J, Zhang Y W, Zhang W. Studies of agent composition model of PSE-Bio workflow [C]// The 4th IEEE International Conference on e-Science. 2008: 743-748.[19] Mao G Y, Xie J. SVG-based interactive visualization of PSE-Bio [C]// The 2009 High Performance Computing and Application. 2010: 288-294.[20] Yu L, Xie J, Cheng X. BNMatch: a cytoscape plugin for querying and visualizing matched similar networks [C]// The 2010 International Conference onComputer and Computational Intelligence. 2010: 476-478.[21] Cheng X, Xie J, Yi R G. Data management and application on CPSE-Bio [C]// The 2011 Proceedings of the International Conference on Human-Centric Computing.2011: 591-599.[22] Xie J, Yi R G, Tan J. Multi-database retrieval technology on CPSE-Bio [C]// The 6th International Conference on Computer Sciences and Convergence InformationTechnology. 2011: 280-284.[23] Xie J, Xia S Y. Virtual technology on CPSE-Bio [C]// The 7th International Conference on Computing and Convergence Technology. 2012: 1478-1481.[24] Cytoscape [EB/OL]. [2012-11-19]. http://www.cytoscape.org.[25] He H, Singh K. Closure-tree: an index structure for graph queries [C]// The 22nd International Conference on Data Engineering. 2006: 38.[26] 张建勋, 古志民, 郑超. 云计算研究进展综述[J]. 计算机应用研究, 2010, 27(2): 429-433.[27] Bader G, Cary M, Sander C. Pathguide: a pathway resource list [J]. Nucleic Acids Res, 2006, 34(S): 504-506.[28] Wu C H. The protein information resource [J]. Nucleic Acids Res, 2003, 31(1): 345-347.[29] Orchard S. Protein interaction data curation: the International Molecular Exchange (IMEx) consortium [J]. Nature Methods, 2012, 9(4): 345-350.[30] Borden T, Hennessy J, Rymarczyk J. Multiple operating systems on one processor complex [J]. IBM Systems Journal, 1989, 28: 104-123.[31] Habib I. Virtualization with KVM [J]. Linux J, 2008, 166: 8. |