[1] Massart M E, Murre C. Helix-loop-helix proteins: regulators of transcription in eucaryotic organisms [J]. Mol Cell Biol, 2000, 20(2): 429-440.
[2] Kong Q, Pattanaik S, Feller A, et al. Regulatory switch enforced by basic helix-loop-helix and ACTdomain mediated dimerizations of the maize transcription factor R [J]. Proc Natl Acad Sci USA, 2012, 109(30): E2091-E2097.
[3] Toledo-Ortiz G, Huq E, Quail P H. The Arabidopsis basic/helix-loop-helix transcription factor family [J]. Plant Cell, 2003, 15(8): 1749-1770.
[4] 朱玉贤, 李毅, 郑晓峰. 现代分子生物学[M]. 3 版. 北京: 高等教育出版社, 2008: 305-307.
[5] Bailey P C, Martin C, Toledo-Ortiz G, et al. Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana [J]. Plant Cell, 2003, 15(11): 2497-2502.
[6] Li X, Duan X, Jiang H, et al. Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis [J]. Plant Physiol, 2006, 141(4): 1167-1184.
[7] Heim M A, Jakoby M, Werber M, et al. The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity [J]. Mol Biol Evol, 2003, 20(5): 735-747.
[8] Murakami M, Ashikari M, Miura K, et al. The evolutionarily conserved OsPRR quintet: rice pseudo-response regulators implicated in circadian rhythm [J]. Plant Cell Physiol, 2003, 44(11): 1229-1236.
[9] Ludwig S R, Habera L F, Dellaporta S L, et al. Lc, a member of the maize R gene family responsible for tissue-specific anthocyanin production, encodes a protein similar to transcriptional activators and contains the myc-homology region [J]. Proc Natl Acad Sci USA, 1989, 86(18): 7092-7096.
[10] Petroni K, Cominelli E, Consonni G, et al. The developmental expression of the maize regulatory gene Hopi determines germination-dependent anthocyanin accumulation [J]. Genetics, 2000, 155(1): 323-336.
[11] Yi K, Wu Z, Zhou J, et al. OsPTF1, a novel transcription factor involved in tolerance to phosphate starvation in rice [J]. Plant Physiol, 2005, 138(4): 2087-2096.
[12] Zhang F, Gonzalez A, Zhao M, et al. A network of redundant bHLH proteins functions in all TTG1-dependent pathways of Arabidopsis [J]. Development, 2003, 130(20): 4859-4869.
[13] Penfield S, Josse E M, Kannangara R, et al. Cold and light control seed germination through the bHLH transcription factor SPATULA [J]. Curr Biol, 2005, 15(22): 1998-2006.
[14] Kondou Y, Nakazawa M, Kawashima M, et al. Retarded growth of EMBRYO1, a new basic helix loop-helix protein, expresses in endosperm to control embryo growth [J]. Plant Physiol, 2008, 147(4): 1924-1935.
[15] Strable J, Scanlon M J. Maize (Zea mays): a model organism for basic and applied research in plant biology [J]. Cold Spring Harb Protoc, 2009, doi: 10.1101/pdb. emo132.
[16] Carpita N C, Mccann M C. Maize and sorghum: genetic resources for bioenergy grasses [J]. Trends Plant Sci, 2008, 13(8): 415-420.
[17] Motto M, Hartings H, Fracassetti M, et al. Grain quality-related traits in maize: gene identification and exploitation [J]. Maydica, 2011, 56(3): 291.
[18] Wang G, Wang H, Zhu J, et al. An expression analysis of 57 transcription factors derived from ESTs of developing seeds in maize (Zea mays) [J]. Plant Cell Rep, 2010, 29(6): 545-559.
[19] Wang G,Wang F, Zhang X, et al. Opaque1 encodes a myosin Ⅺmotor protein that is required for endoplasmic reticulum motility and protein body formation in maize endosperm [J]. Plant Cell, 2012, 24(8): 3447-3462.
[20] Wang G F, Zhang X W, Wang F, et al. Isolation of high quality RNA from cereal seeds containing high levels of starch [J]. Phytochem Anal, 2012, 23(2): 159-163.
[21] Debernardi J M, Rodriguez R E, Mecchia M A, et al. Functional specialization of the plant miR396 regulatory network through distinct microRNA target interactions [J]. PLoS Genet, 2012, 8(1): e1002419.
[22] Atchley W R, Fitch W M. A natural classification of the basic helix-loop-helix class of transcription factors [J]. Proc Natl Acad Sci USA, 1997, 94(10): 5172-5176.
[23] Friedrichsen D M, Nemhauser J, Muramitsu T, et al. Three redundant brassinosteroid early response genes encode putative bHLH transcription factors required for normal growth [J]. Genetics, 2002, 162(3): 1445-1456.
[24] Lorrain S, Allen T, Duek P D, et al. Phytochrome-mediated inhibition of shade avoidance involves degradation of growth-promoting bHLH transcription factors [J]. Plant J, 2008, 53(2): 312-323.
[25] Bou-Torrent J, Roig-Villanova I, Galstyan A, et al. PAR1 and PAR2 integrate shade and hormone transcriptional networks [J]. Plant Signal Behav, 2008, 3(7): 453-454.
[26] Brioudes F, Joly C, Szecsi J, et al. Jasmonate controls late development stages of petal growth in Arabidopsis thaliana [J]. Plant J, 2009, 60(6): 1070-1080.
[27] Heang D, Sassa H. Antagonistic actions of HLH/bHLH proteins are involved in grain length and weight in rice [J]. PLoS One, 2012, 7(2): e31325.
[28] Kalsotra A, Cooper T A. Functional consequences of developmentally regulated alternative splicing [J]. Nat Rev Genet, 2011, 12(10): 715-729.
[29] Baek J M, Han P, Iandolino A, et al. Characterization and comparison of intron structure and alternative splicing between Medicago truncatula, Populus trichocarpa, Arabidopsis and rice [J]. Plant Mol Biol, 2008, 67(5): 499-510.
[30] Parra-Unda R, Vaca-Paniagua F, Jimenez L, et al. Cu, Zn superoxide dismutase: cloning and analysis of the Taenia solium gene and Taenia crassiceps
cDNA [J]. Exp Parasitol, 2012, 130(1): 32-38.
[31] Miao L X, Cao Z J, Shen C, et al. Alternative splicing of breast cancer associated gene BRCA1 from breast cancer cell line [J]. J Biochem Mol Biol, 2007, 40(1): 15-21.
[32] Kitamura-Abe S, Itoh H, Washio T, et al. Characterization of the splice sites in GT-AG and GCAG introns in higher eukaryotes using full-length cDNAs [J]. J Bioinform Comput Biol, 2004, 2(2): 309-331.
[33] Procissi A, Piazza P, Tonelli C. A maize r1 gene is regulated post-transcriptionally by differential splicing of its leader [J]. Plant Mol Biol, 2002, 49(2): 239-248.
[34] James A B, Syed N H, Bordage S, et al. Alternative splicing mediates responses of the Arabidopsis circadian clock to temperature changes [J]. Plant Cell, 2012, 24(3): 961-981.
[35] Li Y, Humbert S, Howell S H. ZmbZIP60 mRNA is spliced in maize in response to ER stress [J]. BMC Res Notes, 2012, 5: 144.
