生命科学

Cupriavidus metallidurans CH34中2个苯酚降解基因簇的筛选与功能鉴定

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  • (上海大学 生命科学学院 上海市能源作物育种及应用重点实验室,上海 200444)

网络出版日期: 2012-08-30

基金资助

上海市科委重点实验室资助项目(08DZ2270800);上海市高校选拔优秀青年教师科研专项基金资助项目(SHU08085);上海大学创新基金资助项目

Screening and Characterization of Two PhenolDegrading Gene Clusters from Cupriavidus metallidurans CH34

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  • (Shanghai Key Laboratory of Bio-energy Crops, School of Life Sciences, Shanghai University, Shanghai 200444, China)

Online published: 2012-08-30

摘要

Cupriavidus metallidurans (C.metallidurans) CH34是一种重金属耐受性细菌,能在以苯酚、甲苯酚、苯甲酸、苯胺等芳香族化合物为唯一碳源和能源的培养基中生长,其基因组中含有2个苯酚降解基因簇.以载体pIndigoBAC 5构建C.metallidurans CH34的细菌人工染色体(bacterial artificial chromosome,BAC)文库,获得约3万个克隆,平均插入片段大小为30 kb,插入频率为98%,推测该文库覆盖CH34基因组约1 240倍.用PCR筛选文库中的3 000个单克隆,共获得9个阳性克隆,其中5个克隆含有长基因簇,4个含有短基因簇,并从中得到含有全长苯酚降解基因簇的克隆.利用以苯酚为唯一碳源的无机盐培养基,研究2个基因簇在大肠杆菌中的表达情况.结果显示,两个基因簇均表现出了苯酚降解能力,短簇的降酚能力要优于长簇.

本文引用格式

李莉,张俊亚,唐远平,宋任涛,朱晨光 . Cupriavidus metallidurans CH34中2个苯酚降解基因簇的筛选与功能鉴定[J]. 上海大学学报(自然科学版), 2012 , 18(4) : 435 -440 . DOI: 10.3969/j.issn.1007-2861.2012.04.020

Abstract

Cupriavidus metallidurans (C.metallidurans) CH34 is a kind of heavy metalresistant bacterium, whose genome own two phenoldegrading gene clusters and can grow on the medium that has phenol, cresol, benzoic acid, aniline as sole carbon and energy source. By using vector pIndigoBAC 5, a bacterial artificial chromosome (BAC) library of C.metallidurans CH34 was constructed and thirty thousand clones were obtained, from which 98% of the clones had an insertion fragment with average size of 30 kb. It was deduced that the whole BAC library size is about 1 240 times of the genome size. More than 3 000 clones were screened with PCR and nine positive clones were obtained: five with longer gene clusters and four with shorter clusters. Two clones with total length of phenoldegrading gene cluster were used to study its expression in Escherichia coli (E.coli) on the medium using phenol as the sole carbon source. The results indicate that both clones have the ability to degrade phenol, and the one carrying a shorter cluster shows stronger ability than that of the one with longer cluster.
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