上海大学学报(自然科学版) ›› 2011, Vol. 17 ›› Issue (5): 631-635.doi: 10.3969/j.issn.1007-2861.2011.05.011

• 数理化科学 • 上一篇    下一篇

p53振子的形成机制及microRNA对p53目标基因表达的精细调控

张志勇,徐凤丹   

  1. 上海大学 理学院,上海 200444
  • 收稿日期:2010-02-03 出版日期:2011-10-26 发布日期:2011-10-26
  • 通讯作者: 张志勇(1979~),男,博士研究生,研究方向为复杂动力系统和系统生物学. E-mail:gothel@gmail.com E-mail:gothel@gmail.com
  • 基金资助:

    上海大学研究生创新基金资助项目(A.16-0101-09-502)

Mechanism of p53 Oscillations and MicroRNA Regulation of p53 Target Genes

ZHANG Zhi-yong,XU Feng-dan   

  1. College of Sciences, Shanghai University, Shanghai 200444, China
  • Received:2010-02-03 Online:2011-10-26 Published:2011-10-26

摘要: 肿瘤抑制因子p53调控着大量的基因,在肿瘤抑制中起着关键作用.实验结果表明,当DNA受损后,p53的表达呈现周期性振荡.已有的一些p53振子的理论模型,其振子产生机制通常依赖于p53和Mdm2之间相互作用的时滞因素.考虑基因表达的转录和翻译过程,运用动力学方程建模的方法,给出一种新模型,并利用Hopf分叉理论,给出p53振子产生的条件.数值模拟结果表明,与已有的时滞模型相比,该模型对参数具有更好的鲁棒性,较好地解释了p53振子的产生机制.最近的许多实验表明,p53调控着miR-34家族中大量microRNA的表达,这些microRNA又在后转录水平上对p53的下游目标基因起着调控作用.在这一模型基础上,研究microRNA加入p53调控网络后所起的调控作用,数值模拟结果初步表明,microRNA对p53下游目标基因表达起到了精细调控作用.

关键词: microRNA, p53基因, 基因调控

Abstract: As a key tumor suppressor, p53 plays an important role in the suppression of tumorgenesis, which functions as a transcription factor, controlling the expression of a number of target genes. Oscillations of p53 expression were observed after DNA damage. Some models were proposed to explain the mechanism for p53 oscillations. However, many of these models suggest that the time delay between p53 and Mdm2 is the key factor triggering the oscillations. This paper proposes a new model based on chemical kinetics in which the transcriptional and translational process are considered separately and sufficient conditions for p53 oscillations are given by application of the Hopf bifurcation theory. Numerical simulations indicate that our model is more robust to parameter variations compared with the time delay models, thus giving a better explanation to the mechanism for p53 oscillations. Recently, microRNAs regulated by p53 were identified by several experimental studies. These studies highlight the microRNAs miR-34 as direct, conserved p53 target genes and suggest that miR-34 as central mediators of p53 target genes regulates their expression at post-transcriptional level. The regulation effects of miR-34 in our framework model are briefly investigated. Numerical evidences are given to show that microRNAs have a refined regulation of p53 target genes.

Key words: gene regulation, microRNA, p53 gene

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